STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW80513.1Beta-glucosidase. (815 aa)    
Predicted Functional Partners:
SFW84043.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.707
SFW43759.1
Beta-glucosidase.
  
  
 
0.643
SFW80505.1
F5/8 type C domain-containing protein.
 
  
 
0.641
SFW69448.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.640
SFW78633.1
Cellulose binding domain-containing protein.
  
  
  0.620
SFW80509.1
F5/8 type C domain-containing protein.
    
 
0.614
SFW52530.1
Beta-glucosidase.
    
 0.586
SFW92294.1
Glycosyl hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
    
 0.586
SFW77967.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
     
 0.562
SFW80784.1
Cellulase/cellobiase CelA1; Belongs to the glycosyl hydrolase family 6.
 
  
  0.556
Your Current Organism:
Amycolatopsis australiensis
NCBI taxonomy Id: 546364
Other names: A. australiensis, Amycolatopsis australiensis Tan et al. 2006, Amycolatopsis sp. GY048, Amycolatopsis sp. GY049, Amycolatopsis sp. GY056, Amycolatopsis sp. GY064, Amycolatopsis sp. GY269, Amycolatopsis sp. GY276, Amycolatopsis sp. GY286, DSM 44671, JCM 15587, NCIMB 14142, strain GY048
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