STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW82653.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (550 aa)    
Predicted Functional Partners:
SFW82657.1
Peptide/nickel transport system permease protein.
 
 0.979
SFW82661.1
Peptide/nickel transport system permease protein.
 
 
 0.967
SFW82665.1
Peptide/nickel transport system substrate-binding protein.
 
 
 0.946
SFW80013.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
 
0.914
SFW79636.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.909
SFW62956.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.899
SFW56957.1
Energy-coupling factor transport system permease protein.
  
 0.875
SFW56242.1
Peptide/nickel transport system permease protein.
 
 0.871
SFW52717.1
Peptide/nickel transport system permease protein.
 
 0.862
SFW65782.1
Peptide/nickel transport system permease protein.
 
 0.859
Your Current Organism:
Amycolatopsis australiensis
NCBI taxonomy Id: 546364
Other names: A. australiensis, Amycolatopsis australiensis Tan et al. 2006, Amycolatopsis sp. GY048, Amycolatopsis sp. GY049, Amycolatopsis sp. GY056, Amycolatopsis sp. GY064, Amycolatopsis sp. GY269, Amycolatopsis sp. GY276, Amycolatopsis sp. GY286, DSM 44671, JCM 15587, NCIMB 14142, strain GY048
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