STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW82713.1Ketosteroid isomerase homolog. (135 aa)    
Predicted Functional Partners:
SFW82706.1
Probable F420-dependent oxidoreductase, Rv1855c family.
 
     0.818
SFW82710.1
Catechol 2,3-dioxygenase.
 
     0.804
SFW82717.1
MarR family transcriptional regulator, transcriptional regulator for hemolysin.
 
     0.779
SFW72107.1
Hypothetical protein.
  
     0.738
SFW90545.1
Hypothetical protein.
  
     0.577
SFW82147.1
Enterochelin esterase.
  
     0.553
SFW85826.1
Alkylhydroperoxidase AhpD family core domain-containing protein.
  
     0.549
SFW91704.1
Ketosteroid isomerase-related protein.
  
  
  0.525
SFW90492.1
Type VII secretion integral membrane protein EccD.
  
     0.503
SFW73491.1
Uncharacterized membrane protein.
  
     0.499
Your Current Organism:
Amycolatopsis australiensis
NCBI taxonomy Id: 546364
Other names: A. australiensis, Amycolatopsis australiensis Tan et al. 2006, Amycolatopsis sp. GY048, Amycolatopsis sp. GY049, Amycolatopsis sp. GY056, Amycolatopsis sp. GY064, Amycolatopsis sp. GY269, Amycolatopsis sp. GY276, Amycolatopsis sp. GY286, DSM 44671, JCM 15587, NCIMB 14142, strain GY048
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