STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW84967.1D-arabinose 1-dehydrogenase, Zn-dependent alcohol dehydrogenase family. (338 aa)    
Predicted Functional Partners:
SFW49467.1
Alcohol dehydrogenase, class IV.
  
 0.835
SFW86338.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
 
0.795
SFW83176.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
 
0.784
SFW62584.1
S-(hydroxymethyl)mycothiol dehydrogenase.
  
 
0.780
SFW87765.1
Alcohol dehydrogenase, class IV.
  
 0.769
SFW86632.1
Maleylacetate reductase.
  
 0.741
SFW73622.1
Ferredoxin-NADP reductase.
  
 
 0.729
SFW59818.1
L-fuculose 1-phosphate aldolase.
  
  
  0.611
SFW83828.1
L-ribulose 5-phosphate 4-epimerase.
  
  
  0.610
SFW84235.1
Threonine dehydrogenase.
 
 
0.610
Your Current Organism:
Amycolatopsis australiensis
NCBI taxonomy Id: 546364
Other names: A. australiensis, Amycolatopsis australiensis Tan et al. 2006, Amycolatopsis sp. GY048, Amycolatopsis sp. GY049, Amycolatopsis sp. GY056, Amycolatopsis sp. GY064, Amycolatopsis sp. GY269, Amycolatopsis sp. GY276, Amycolatopsis sp. GY286, DSM 44671, JCM 15587, NCIMB 14142, strain GY048
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