Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFW65942.1 | SFW90753.1 | SAMN04489730_2553 | SAMN04489730_7687 | Amino acid/polyamine/organocation transporter, APC superfamily. | Asparagine:proton symporter, AAT family. | 0.425 |
SFW90751.1 | SFW90753.1 | SAMN04489730_7686 | SAMN04489730_7687 | DNA-binding transcriptional regulator, FadR family. | Asparagine:proton symporter, AAT family. | 0.773 |
SFW90751.1 | SFW90755.1 | SAMN04489730_7686 | SAMN04489730_7688 | DNA-binding transcriptional regulator, FadR family. | L-asparaginase II. | 0.784 |
SFW90751.1 | SFW90757.1 | SAMN04489730_7686 | SAMN04489730_7689 | DNA-binding transcriptional regulator, FadR family. | Aspartate ammonia-lyase. | 0.782 |
SFW90751.1 | SFW90759.1 | SAMN04489730_7686 | SAMN04489730_7690 | DNA-binding transcriptional regulator, FadR family. | Hypothetical protein. | 0.613 |
SFW90753.1 | SFW65942.1 | SAMN04489730_7687 | SAMN04489730_2553 | Asparagine:proton symporter, AAT family. | Amino acid/polyamine/organocation transporter, APC superfamily. | 0.425 |
SFW90753.1 | SFW90751.1 | SAMN04489730_7687 | SAMN04489730_7686 | Asparagine:proton symporter, AAT family. | DNA-binding transcriptional regulator, FadR family. | 0.773 |
SFW90753.1 | SFW90755.1 | SAMN04489730_7687 | SAMN04489730_7688 | Asparagine:proton symporter, AAT family. | L-asparaginase II. | 0.791 |
SFW90753.1 | SFW90757.1 | SAMN04489730_7687 | SAMN04489730_7689 | Asparagine:proton symporter, AAT family. | Aspartate ammonia-lyase. | 0.815 |
SFW90753.1 | SFW90759.1 | SAMN04489730_7687 | SAMN04489730_7690 | Asparagine:proton symporter, AAT family. | Hypothetical protein. | 0.613 |
SFW90753.1 | SFW91629.1 | SAMN04489730_7687 | SAMN04489730_8063 | Asparagine:proton symporter, AAT family. | L-asparaginase. | 0.495 |
SFW90753.1 | SFW91797.1 | SAMN04489730_7687 | SAMN04489730_8172 | Asparagine:proton symporter, AAT family. | Amino acid transporter. | 0.439 |
SFW90755.1 | SFW90751.1 | SAMN04489730_7688 | SAMN04489730_7686 | L-asparaginase II. | DNA-binding transcriptional regulator, FadR family. | 0.784 |
SFW90755.1 | SFW90753.1 | SAMN04489730_7688 | SAMN04489730_7687 | L-asparaginase II. | Asparagine:proton symporter, AAT family. | 0.791 |
SFW90755.1 | SFW90757.1 | SAMN04489730_7688 | SAMN04489730_7689 | L-asparaginase II. | Aspartate ammonia-lyase. | 0.887 |
SFW90755.1 | SFW90759.1 | SAMN04489730_7688 | SAMN04489730_7690 | L-asparaginase II. | Hypothetical protein. | 0.613 |
SFW90757.1 | SFW90751.1 | SAMN04489730_7689 | SAMN04489730_7686 | Aspartate ammonia-lyase. | DNA-binding transcriptional regulator, FadR family. | 0.782 |
SFW90757.1 | SFW90753.1 | SAMN04489730_7689 | SAMN04489730_7687 | Aspartate ammonia-lyase. | Asparagine:proton symporter, AAT family. | 0.815 |
SFW90757.1 | SFW90755.1 | SAMN04489730_7689 | SAMN04489730_7688 | Aspartate ammonia-lyase. | L-asparaginase II. | 0.887 |
SFW90757.1 | SFW90759.1 | SAMN04489730_7689 | SAMN04489730_7690 | Aspartate ammonia-lyase. | Hypothetical protein. | 0.613 |
page 1 of 2