Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
ACO44853.1Putative sugar ABC transporter, permease component. (285 aa)    
Predicted Functional Partners:
ACO44854.1
Putative sugar ABC transporter, permease component.
 0.996
ACO44855.1
Putative sugar ABC transporter, periplasmic component.
 
 0.986
ACO45629.1
Putative ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.
 
 0.985
ACO45063.1
Putative sugar ABC transporter, permease component.
 
 
 0.890
ACO45827.1
Putative Maltose ABC transporter, permease component.
 
 
 0.890
ACO46300.2
Putative sugar ABC transporter, permease component.
 
 
 0.890
ACO45064.1
Putative sugar ABC transporter, periplasmic component.
 
 
 0.883
ACO46382.1
Putative sugar ABC transporter, permease component.
 
 
 0.879
ACO45201.2
Putative sugar ABC transporter, periplasmic component.
 
 
 0.876
ACO45342.1
Putative ABC transporter, permease component.
 
 
 0.844
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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