STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO44917.1Putative Peptidase S1 and S6, chymotrypsin/Hap precursor. (389 aa)    
Predicted Functional Partners:
ACO44918.1
Hypothetical protein, precursor.
       0.740
ddrD
Putative DNA damage response protein D.
       0.668
pnp
Putative polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase); Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
  
 0.517
ACO44955.1
Putative adenylate/guanylate cyclase.
  
  
 0.492
ACO44919.1
Putative LexA repressor.
     
 0.487
ACO46247.1
Hypothetical protein, precursor.
  
 
 0.481
ACO46460.1
Putative Mov34/MPN/PAD-1 family protein.
   
  0.452
ACO46261.1
Putative membrane-associated zinc metalloproteases; putative membrane protein.
 
  
 0.447
glnS
Putative Glutaminyl-tRNA synthetase (Glutamine--tRNA ligase) (GlnRS).
  
    0.444
ACO45843.1
Putative Fatty acid oxidation complex subunit alpha.
  
 
  0.429
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.