Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACO44971.1Conserved hypothetical protein, precursor. (535 aa)    
Predicted Functional Partners:
ACO44972.1
Putative Flavin reductase-like, FMN-binding protein.
 
     0.779
dnaX
Putative DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
     
 0.634
ACO46751.1
Conserved hypothetical protein, precursor.
 
     0.612
ACO44973.2
Conserved hypothetical protein.
       0.586
ACO45266.1
Conserved hypothetical protein, precursor.
  
    0.543
ACO46571.1
Conserved hypothetical protein.
  
     0.529
ACO46618.1
Putative glucose-6-P dehydrogenase subunit.
  
     0.529
ACO46933.1
Putative D-Ala-D-Ala carboxypeptidase.
 
     0.511
ACO46113.1
Putative Beta-lactamase, precursor.
 
     0.508
ACO46577.1
Conserved hypothetical protein, precursor.
  
     0.507
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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