Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACO45009.1Conserved hypothetical protein, precursor. (929 aa)    
Predicted Functional Partners:
ACO45010.1
Conserved hypothetical protein, precursor.
 
    0.960
ACO45007.1
Conserved hypothetical protein, precursor.
 
     0.859
ACO46748.1
Conserved hypothetical protein.
 
    0.711
ACO45291.1
Hypothetical protein.
  
     0.680
ACO45266.1
Conserved hypothetical protein, precursor.
  
     0.672
ACO46737.1
Conserved hypothetical protein, precursor.
 
    0.660
ACO44913.1
Hypothetical protein.
  
     0.656
ACO45008.1
Conserved hypothetical protein, precursor.
       0.640
ACO46009.2
Conserved hypothetical protein, precursor.
  
     0.638
ACO45011.1
Conserved hypothetical protein, precursor.
 
    0.630
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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