STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO45054.2Putative LmbE-like protein. (237 aa)    
Predicted Functional Partners:
bshC
Hypothetical protein; Belongs to the BshC family.
 
   
 0.780
ACO46074.1
Putative glycosyltransferase.
 
  
 0.735
ACO45601.1
Hypothetical protein.
  
     0.714
ACO45234.1
Putative Magnesium protoporphyrin chelatase.
  
     0.632
ACO45028.1
Hypothetical protein.
  
     0.612
ACO47372.2
Putative Thioredoxin reductase (putative pyridine nucleotide-disulfide oxidoreductase family protein).
  
  
 0.549
ACO44873.1
Hypothetical protein.
  
    0.508
ACO45597.1
Conserved hypothetical protein, precursor.
  
     0.441
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.