Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACO45075.1Conserved hypothetical protein, precursor. (458 aa)    
Predicted Functional Partners:
ACO46577.1
Conserved hypothetical protein, precursor.
  
     0.764
ACO45753.1
Putative Cell wall hydrolase/autolysin, precursor.
  
     0.763
ACO46751.1
Conserved hypothetical protein, precursor.
  
     0.761
ACO45507.1
Conserved hypothetical protein.
  
     0.757
ACO45266.1
Conserved hypothetical protein, precursor.
  
     0.753
ACO46009.2
Conserved hypothetical protein, precursor.
  
     0.752
ACO45291.1
Hypothetical protein.
  
     0.746
ACO44878.1
Putative GCN5-related N-acetyltransferase.
  
     0.739
ACO46346.1
Putative Sporulation related domain-containing protein.
  
     0.738
ACO46113.1
Putative Beta-lactamase, precursor.
  
     0.737
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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