STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO45128.1Hypothetical protein; Belongs to the UPF0102 family. (114 aa)    
Predicted Functional Partners:
ACO45129.1
Putative haloacid dehalogenase-like hydrolase.
       0.781
ACO45130.1
Hypothetical protein.
       0.781
ACO45127.1
Hypothetical protein.
       0.618
ACO46779.1
Putative Mg2+ chelatase family protein.
 
  
 0.588
ACO45375.2
Putative competence protein ComF.
 
    0.531
ACO47387.1
Putative DNA processing protein DprA (Smf).
 
    0.505
ACO45131.1
Putative Uracil permease (Uracil transporter).
       0.465
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.