Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACO45154.1Conserved hypothetical protein, precursor. (179 aa)    
Predicted Functional Partners:
ACO46698.1
Putative cyclase/dehydrase.
  
    0.689
ACO45045.1
Putative Cyclase/dehydrase.
  
    0.666
ACO46289.1
Hypothetical protein.
 
  
 0.633
ACO44884.1
Putative DNA topoisomerase (topoisomerase I).
 
    0.628
ACO46629.1
Putative malto-oligosyltrehalose synthase.
  
    0.550
ACO46699.1
Putative S-(hydroxymethyl)glutathione dehydrogenase (Class III alcohol dehydrogenase).
 
    0.486
ACO44928.1
Hypothetical protein.
  
     0.455
ACO46697.2
Hypothetical protein.
  
    0.443
rplY
Putative 50S ribosomal protein L25 (General stress protein CTC); This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
       0.423
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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