Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
msrBPutative Peptide methionine sulfoxide reductase msrB. (150 aa)    
Predicted Functional Partners:
msrA
Peptide-methionine-(S)-S-oxide reductase (Peptide methionine sulfoxide reductase); Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.988
ACO45533.2
Hypothetical protein.
   
 0.635
grpE
Putative Protein grpE, HSP-70 cofactor; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several [...]
   
 
 0.593
ACO45230.1
Putative propionyl-CoA carboxylase beta chain (PCCase) (Propanoyl-CoA:carbon dioxide ligase).
       0.560
rpmJ
Putative 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.462
ACO46523.1
Hypothetical protein.
   
 0.435
ACO46163.1
Putative Succinate dehydrogenase, hydrophobic membrane anchor protein SdhD.
   
    0.432
rplT
Putative 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
   0.411
rpmG
Putative 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
    
 
 0.411
ACO45843.1
Putative Fatty acid oxidation complex subunit alpha.
   
 
 0.409
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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