Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
paaDPutative phenylacetic acid degradation protein. (164 aa)    
Predicted Functional Partners:
paaA
Putative phenylacetic acid degradation protein.
 
 
 0.997
paaB
Putative phenylacetic acid degradation protein.
 
 
 0.997
paaC
Putative phenylacetic acid degradation protein.
 
 
 0.997
ACO45014.1
Putative Phenylacetic acid degradation protein.
 
 
 0.976
paaZ
Putative phenylacetic acid degradation protein.
 
  
 0.940
ACO45257.1
Putative enoyl-CoA hydratase paaG.
 
 
 0.937
thiD
Putative phosphomethylpyrimidine kinase.
       0.567
ACO46391.1
Putative Phenylacetate--CoA ligase.
 
   
 0.553
thiE
Putative thiamine-phosphate diphosphorylase (thiamine-phosphate pyrophosphorylase); Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
       0.530
ACO45282.1
Putative thiamine biosynthesis protein.
       0.530
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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