Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACO45344.2Putative histidine kinase, classic. (383 aa)    
Predicted Functional Partners:
phoP
Putative response regulator, OmpR.
 
   0.809
ACO47245.1
Putative response regulator, OmpR.
 
   0.807
ACO44956.2
Putative response regulator, OmpR.
   0.799
ACO46956.2
Putative response regulator, OmpR.
 
   0.796
ACO46982.1
Putative response regulator, CheY.
 
   0.793
ACO46106.2
Putative histidine kinase, classic.
 
 
 0.784
ACO47385.1
Putative response regulator, OmpR.
 
 
 0.784
ACO45706.2
Putative response regulator, CheY.
 
   
 0.778
ACO46921.1
Putative response regulator, SarP.
  
     0.773
ACO46402.1
Putative histidine kinase, classic; putative membrane protein.
 
 
 0.769
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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