Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACO45420.1Hypothetical protein. (171 aa)    
Predicted Functional Partners:
ACO45111.1
Putative GCN5-related N-acetyltransferase.
  
     0.760
ACO44913.1
Hypothetical protein.
  
     0.759
atpE
Putative V-type ATP synthase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
     0.746
ACO46559.1
Putative NUDIX hydrolase; Belongs to the Nudix hydrolase family.
  
     0.743
ACO45868.1
Putative Outer membrane chaperone Skp (OmpH), precursor.
  
     0.739
ACO46143.1
Putative Alkaline shock protein.
  
     0.732
ACO46736.1
Putative Type IV pilus assembly protein PilO precursor.
  
     0.716
ACO45682.1
Putative S-layer protein.
  
     0.707
ACO45266.1
Conserved hypothetical protein, precursor.
  
     0.701
trxB
Putative thioredoxin-disulfide reductase (thioredoxin reductase).
       0.690
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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