STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO45538.1Hypothetical protein. (180 aa)    
Predicted Functional Partners:
ACO45541.1
Putative phage tail sheath protein.
 
 
 0.973
ACO45539.1
Hypothetical protein.
 
    0.963
ACO45543.1
Putative GPW/gp25 family.
 
   0.943
ACO45544.1
Hypothetical protein.
 
 
 
 0.943
ACO45547.1
Hypothetical protein.
 
   0.937
ACO45542.1
Hypothetical protein.
 
 
   0.911
ACO45536.1
Hypothetical protein.
 
     0.868
ACO45548.1
Putative phage protein D.
 
  
 0.857
ACO45540.1
Hypothetical protein.
 
    
0.844
ACO45545.1
Putative forkhead associated domain protein.
 
     0.836
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.