Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACO45541.1Putative phage tail sheath protein. (549 aa)    
Predicted Functional Partners:
ACO45543.1
Putative GPW/gp25 family.
 
 
 0.996
ACO45545.1
Putative forkhead associated domain protein.
 
 
 0.996
ACO45544.1
Hypothetical protein.
 
 
 0.985
ACO45547.1
Hypothetical protein.
 
 
 0.984
ACO45540.1
Hypothetical protein.
 
 
 0.982
ACO45538.1
Hypothetical protein.
 
 
 0.976
ACO45542.1
Hypothetical protein.
 
 
 
 0.964
ACO45539.1
Hypothetical protein.
 
  
 0.927
ACO45549.2
Putative AAA ATPase.
   
 0.868
ACO45548.1
Putative phage protein D.
 
   
 0.860
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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