STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO45667.1Putative ABC transporter, permease component. (281 aa)    
Predicted Functional Partners:
ACO45666.1
Putative ABC transporter, permease component.
 
  
 0.969
ACO45668.1
Putative ABC transporter, ATP-binding component.
 
  
 0.942
ACO45888.1
Putative ABC transporter, ATP-binding component.
 
  
 0.810
ACO45889.1
Putative ABC transporter, permease component.
 
  
 0.809
ACO45669.3
Hypothetical protein.
 
     0.768
ACO45670.1
Putative 3-methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family.
       0.725
ACO45665.1
Hypothetical protein.
       0.551
ACO45580.1
Putative GCN5-related N-acetyltransferase.
  
     0.515
ACO45671.2
Putative Major Facilitator Superfamily (MFS_1) transporter.
       0.505
ACO47291.1
Hypothetical protein.
  
     0.469
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.