STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO45668.1Putative ABC transporter, ATP-binding component. (331 aa)    
Predicted Functional Partners:
ACO45666.1
Putative ABC transporter, permease component.
 
  
 0.960
ACO45667.1
Putative ABC transporter, permease component.
 
  
 0.942
ACO45889.1
Putative ABC transporter, permease component.
 
  
 0.839
ACO45890.1
Putative ABC transporter, permease component.
 
  
 0.828
ACO45669.3
Hypothetical protein.
 
     0.810
ACO45670.1
Putative 3-methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family.
       0.807
ACO45671.2
Putative Major Facilitator Superfamily (MFS_1) transporter.
       0.570
ACO45665.1
Hypothetical protein.
       0.444
ACO45580.1
Putative GCN5-related N-acetyltransferase.
  
     0.420
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.