Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACO45727.2Putative PAP2 superfamily protein. (275 aa)    
Predicted Functional Partners:
ACO45728.1
Putative ABC transporter, ATP-binding component.
       0.694
atpC
Putative V-type ATP synthase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
 
 0.543
rplF
Putative 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.483
ACO44964.1
Putative Cytochrome P450.
  
  0.445
ACO45685.1
Putative cytochrome P450.
  
  0.445
ACO47325.1
Putative cytochrome P450.
  
  0.445
atpI
Putative V-type ATP synthase subunit I; putative membrane protein; Belongs to the V-ATPase 116 kDa subunit family.
    
   0.424
ACO44989.1
Putative Major facilitator superfamily MFS_1.
  
 
  0.411
ACO45255.1
Putative Medium-chain-fatty-acid--CoA ligase (Medium-chain acyl- CoA synthetase).
    
  0.407
ACO45707.1
Putative long-chain-fatty-acid--CoA ligase.
    
  0.407
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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