Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACO45767.1Putative saccharopine dehydrogenase. (405 aa)    
Predicted Functional Partners:
ACO45681.2
Putative carboxynorspermidine decarboxylase.
 
 
 0.980
speA
Putative arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine.
 
  
 0.933
ACO47312.2
Putative agmatine deiminase; Belongs to the agmatine deiminase family.
    
  0.907
ACO45766.1
Putative YCII-related protein.
       0.773
ACO45768.1
Conserved hypothetical protein.
       0.687
ACO45769.1
Hypothetical protein.
       0.555
aroA-2
Putative 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
       0.525
folE
Putative GTP cyclohydrolase I (GTP-CH-I).
   
   0.441
ACO45771.1
Hypothetical protein; putative membrane protein.
       0.428
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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