Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACO45912.1Hypothetical protein. (286 aa)    
Predicted Functional Partners:
ACO46731.1
Putative Dak phosphatase.
 
 0.907
ACO45913.1
Putative 3-hydroxyisobutyrate dehydrogenase.
       0.837
ACO45914.1
Hypothetical protein.
       0.652
ACO45915.1
Putative SPFH domain / Band 7 family / prohibitin (PHB) protein.
       0.594
ACO46730.2
Hypothetical protein.
 
    0.537
ACO45916.1
SEC-C motif-containing protein; Belongs to the UPF0225 family.
       0.517
ACO45917.1
Putative rRNA (adenosine-2-O-)-methyltransferase (SpoU rRNA methylase); Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
  
    0.464
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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