Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACO46004.1Putative ABC transporter, periplasmic component. (585 aa)    
Predicted Functional Partners:
ACO46005.1
Putative ABC transporter, permease component.
 
 
 0.958
ACO46006.1
Putative ABC transporter, permease component.
 
 
 0.950
ACO46007.1
Putative ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.
 
 
 0.839
ACO46903.1
Putative peptide/oligopeptide/nickel ABC transporter, permease component.
 
 
 0.836
ACO46904.1
Putative peptide/oligopeptide/nickel ABC transporter, permease component.
 
 
 0.817
ACO45906.1
Putative ABC transporter, permease component.
 
 
 0.814
ACO45907.1
Putative ABC transporter, permease component.
 
 
 0.801
ACO46008.1
Putative ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.
 
 
 0.778
ACO45471.1
Putative ABC transporter, periplasmic component, peptide-binding protein.
  
  
 0.755
ACO46902.1
Putative peptide ABC transporter, periplasmic component.
  
  
 0.742
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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