Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACO46039.1Putative GTP-binding TypA/BipA protein. (593 aa)    
Predicted Functional Partners:
guaA
Putative GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.704
engD
Putative GTP-dependent nucleic acid-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
  
  
 0.562
rpsI
Putative 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
    0.548
rimP
Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
  
  
 0.542
ACO46651.1
Putative DEAD-box ATP-dependent RNA helicase 3; Belongs to the DEAD box helicase family.
 
  
 0.535
ACO45194.1
Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
 
  
 0.531
rplA
Putative 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
   
  
 0.524
ACO47120.2
Putative glutamate synthase, large subunit.
  
  
 0.524
nusA
Putative Transcription elongation factor NusA; Participates in both transcription termination and antitermination.
 
    0.511
trmD
Putative tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
  
  
 0.497
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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