Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ACO46063.1Putative dehydrogenase. (398 aa)    
Predicted Functional Partners:
ACO46061.1
Hypothetical protein.
       0.837
ACO46062.2
Putative L-Ala-DL-Glu_epimerase.
       0.837
ACO46060.1
Putative peptidase (renal dipeptidase).
 
    0.767
ACO46059.2
Putative (S)-2-haloacid dehalogenase.
  
    0.724
lysS
Putative lysine--tRNA ligase (lysyl-tRNA synthetase); Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.561
ACO46058.1
Putative serine--pyruvate transaminase (serine--pyruvate aminotransferase).
       0.504
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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