STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
ACO46282.1Putative Ribosomal protein S6 modification protein RimK; putative Lysine biosynthesis protein lysX; Belongs to the RimK family. (288 aa)    
Predicted Functional Partners:
lysZ
Putative acetylglutamate kinase; Catalyzes the phosphorylation of LysW-gamma-alpha- aminoadipate; Belongs to the acetylglutamate kinase family. LysZ subfamily.
 
  
 0.974
ACO47235.1
Putative aminotransferase.
     
  0.900
ACO46283.1
Putative Lysine biosynthesis protein LysW.
     
 0.812
lysK
Putative acetyl-lysine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine.
 
  
 0.774
ACO46285.1
Putative 3-isopropylmalate dehydratase small subunit; Belongs to the LeuD family.
 
   
 0.736
ACO46284.1
Putative zinc finger motif protein.
       0.671
lysY
[LysW]-L-2-aminoadipate 6-phosphate reductase; Catalyzes the NADPH-dependent reduction of [LysW]- aminoadipate 6-phosphate to yield [LysW]-aminoadipate 6-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily.
 
  
 0.601
leuC-2
Putative 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
 
     0.570
ACO46281.1
Putative Transcriptional regulator, MarR family.
 
   
 0.554
ACO46280.1
Putative Drug resistance transporter; Major facilitator family transporter.
       0.448
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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