Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACO46305.1Hypothetical protein. (524 aa)    
Predicted Functional Partners:
ACO46303.1
Hypothetical protein.
 
     0.919
ACO46304.1
Hypothetical protein.
       0.837
ACO46306.1
Putative N-acetylmannosamine kinase, putative sugar kinase.
       0.826
ACO46300.2
Putative sugar ABC transporter, permease component.
       0.804
ACO46301.1
Putative sugar ABC transporter, permease component.
       0.804
ACO46302.1
Hypothetical protein.
       0.773
ACO46299.2
Hypothetical protein.
       0.608
ACO44838.2
Conserved hypothetical protein, precursor; putative membrane protein.
  
     0.590
ACO46307.1
Putative 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.557
ACO47365.2
Hypothetical protein.
  
     0.495
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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