Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACO46386.1Hypothetical protein. (373 aa)    
Predicted Functional Partners:
ACO46387.1
Putative MoxR-like ATPases; putative Magnesium chelatase.
 
  
 0.938
ACO46388.1
Conserved hypothetical protein.
       0.837
ACO46385.2
Hypothetical protein.
       0.674
ACO46598.1
Putative MoxR-like ATPase.
 
  
 0.595
sigA-2
Putative RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
       0.592
ACO45753.1
Putative Cell wall hydrolase/autolysin, precursor.
  
     0.546
ACO47018.1
Putative N-acetyltransferase.
  
     0.504
ACO46613.1
Hypothetical protein.
  
     0.493
ACO46618.1
Putative glucose-6-P dehydrogenase subunit.
  
     0.457
ACO46751.1
Conserved hypothetical protein, precursor.
  
     0.451
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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