Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACO46464.1Putative Sodium ABC transporter, permease component NatB. (421 aa)    
Predicted Functional Partners:
ACO46465.1
Putative Sodium ABC transporter, ATP-binding component NatA.
 
 
 0.992
secE
Putative Preprotein translocase secE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.514
ACO45218.1
Putative S-layer-like protein array-related protein.
  
     0.499
ACO45747.1
Putative S-layer-like array protein.
  
     0.493
ACO46466.1
Hypothetical protein.
       0.482
ACO47017.1
Putative S-layer-like array protein, precursor.
  
     0.446
ACO46463.1
Putative Metallophosphoesterase.
       0.444
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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