STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO46540.2Putative Diguanylate cyclase (GGDEF domain protein). (392 aa)    
Predicted Functional Partners:
ACO45321.1
Putative signal transduction protein: sensor, PAS/PAC domains; regulator, GGDEF/EAL domains.
 
  
 0.834
ACO45359.1
Putative CHASE2 sensory domain-containing diguanylate cyclase.
  
     0.774
ACO46909.1
Hypothetical protein.
 
 
 0.743
ACO45691.2
Putative metal dependent phosphohydrolase.
 
 
 0.731
ACO46021.2
Putative metal dependent phosphohydrolase.
  
 
 0.728
ACO46099.1
Putative Metal dependent phosphohydrolases (HD domain protein).
  
 
 0.654
ACO46793.2
Putative diguanylate cyclase/phosphodiesterase; putative membrane protein.
 
 
0.607
ACO44955.1
Putative adenylate/guanylate cyclase.
  
  
 0.575
ACO47059.1
Conserved hypothetical protein.
 
 
0.556
ACO44926.1
Two-component system, cell cycle response regulator; Putative response regulator, CheY, Guanylate cyclase, GGDEF domain with PAS/PAC sensor and Response Regulator Receiver modulation.
 
 
0.549
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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