Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACO46974.1Putative transcriptional regulator, LytR/CspA/Psr family. (459 aa)    
Predicted Functional Partners:
ACO46973.2
Putative metal dependent phosphohydrolase (HD domain protein).
 
     0.894
rsfS
Putative iojap-related protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.837
ACO46972.1
Hypothetical protein.
 
     0.752
dacA
Conserved hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
       0.640
ACO44839.1
Putative Polysaccharide pyruvyl transferase.
 
   
 0.575
ACO46751.1
Conserved hypothetical protein, precursor.
 
     0.483
ACO45818.1
Conserved hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
     0.446
ACO46970.1
Putative beta-lactamase-like protein; Belongs to the UPF0173 family.
       0.445
ACO46963.1
Putative hydrolase, HAD-superfamily.
  
     0.432
ACO45572.1
Putative S-layer protein, precursor.
  
     0.417
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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