Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACO47021.1Hypothetical protein. (139 aa)    
Predicted Functional Partners:
ACO47020.1
Putative malate dehydrogenase.
       0.668
ACO47022.2
Hypothetical protein.
       0.563
ACO47023.1
Putative ribonuclease BN; putative membrane protein.
       0.494
ACO44913.1
Hypothetical protein.
  
     0.474
ACO46503.1
Putative signal peptidase I (leader peptidase I) (SPase I) (Peptidase S26A); Belongs to the peptidase S26 family.
  
     0.443
ACO46559.1
Putative NUDIX hydrolase; Belongs to the Nudix hydrolase family.
  
     0.414
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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