Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ddrOCPutative transcriptional regulator, XRE family; Repressor specific for genes preceded by a radiation/desiccation response motif (RDRM) site, which is present upstream of several radiation-induced genes. (129 aa)    
Predicted Functional Partners:
irrE
Putative DNA repair regulator protein IrrE (PprI); Plays a central regulatory role in DNA repair and protection pathways in response to radiation stress. Acts as a site-specific metalloprotease that cleaves and inactivates the repressor proteins DdrOC and DdrOP3, resulting in induced expression of genes required for DNA repair and cell survival after exposure to radiation.
 
  
 0.732
ACO47075.1
Hypothetical protein.
     
 0.693
ACO46748.1
Conserved hypothetical protein.
  
     0.612
ACO45695.1
Conserved hypothetical protein, precursor; putative membrane protein.
  
     0.546
ACO44913.1
Hypothetical protein.
  
     0.479
ACO46737.1
Conserved hypothetical protein, precursor.
  
    0.471
ACO45754.1
Conserved hypothetical protein, precursor.
  
     0.467
ACO45010.1
Conserved hypothetical protein, precursor.
  
  
 0.442
ACO45025.1
Putative Ferredoxin.
  
     0.439
atpE
Putative V-type ATP synthase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
     0.428
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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