STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO47136.1Putative 2-Nitropropane dioxygenase. (481 aa)    
Predicted Functional Partners:
ACO47137.1
Leader peptidase (prepilin peptidase) / N-methyltransferase; Putative Prepilin peptidase (Type 4 prepilin-like proteins leader peptide-processing enzyme) (Peptidase A24A-like protein).
       0.570
fabF
Putative Beta-ketoacyl-acyl-carrier-protein synthase I (3-oxoacyl-[acyl-carrier-protein] synthase); Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
  
 0.528
acpP
Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.487
fabD
Putative [Acyl-carrier-protein] S-malonyltransferase (Malonyl CoA-acyl carrier protein transacylase).
  
  
 0.457
ACO47221.1
Hypothetical protein.
  
     0.447
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.