Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACO47192.1Hypothetical protein. (301 aa)    
Predicted Functional Partners:
ACO47193.1
Conserved hypothetical protein.
       0.837
ACO46577.1
Conserved hypothetical protein, precursor.
  
     0.744
ACO45266.1
Conserved hypothetical protein, precursor.
  
     0.742
ACO45753.1
Putative Cell wall hydrolase/autolysin, precursor.
  
     0.733
ACO46146.1
Conserved hypothetical protein, precursor.
  
     0.730
ACO46751.1
Conserved hypothetical protein, precursor.
  
     0.710
ACO46009.2
Conserved hypothetical protein, precursor.
  
     0.702
atpE
Putative V-type ATP synthase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
     0.694
ACO45010.1
Conserved hypothetical protein, precursor.
  
     0.683
ACO45802.2
Putative FAD dependent oxidoreductase.
  
     0.676
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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