STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO47207.2Putative nitrilase superfamily protein. (307 aa)    
Predicted Functional Partners:
ACO47206.1
Putative acetyltransferase.
       0.840
ACO45002.1
Hypothetical protein.
 
     0.803
ACO45003.2
Hypothetical protein.
 
     0.801
ACO47208.2
Putative 5-formyltetrahydrofolate cyclo-ligase family protein.
       0.617
ACO47209.1
Conserved hypothetical protein, precursor.
       0.591
guaA
Putative GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
 
 0.471
pilT-3
Putative Twitching mobility protein.
       0.454
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.