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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
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truAPutative tRNA-pseudouridine synthase I (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase); Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (266 aa)    
Predicted Functional Partners:
tilS
Putative tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
 
  
 0.792
rpoA
Putative DNA-directed RNA polymerase alpha chain (DNA-dependent RNA polymerase); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
  
 0.774
truB
Putative tRNA pseudouridylate synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
  
 
 0.765
rsmH
Putative Methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
 
 
 0.733
ACO47327.2
Putative LysM domains-containing metalloendopeptidase.
  
    0.697
rplQ
Putative 50S ribosomal protein L17.
  
  
 0.658
ACO47328.1
Hypothetical protein.
       0.616
trmB
Putative tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
 
 0.581
rpsI
Putative 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.578
truD
Putative tRNA pseudouridine synthase D (tRNA-uridine isomerase D)(tRNA pseudouridylate synthase D); Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.
   
 
 0.570
Your Current Organism:
Deinococcus deserti
NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115
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