STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v012156Uncharacterized protein. (198 aa)    
Predicted Functional Partners:
CTRI78_v007096
Glucosidase 2 subunit beta.
   
 0.949
fmo1-6
Thiol-specific monooxygenase; Belongs to the FMO family.
 
  
   0.822
CTRI78_v001423
Calnexin-like protein.
    
 0.744
fmo1-4
Thiol-specific monooxygenase.
 
  
   0.705
CTRI78_v003340
Glyco_hydro_63 domain-containing protein.
   
 0.650
CTRI78_v001446
Putative mannosyl-oligosaccharide glucosidase.
   
 0.650
GPH1
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
 0.590
gpt1
UDP-glucose:glycoprotein glucosyltransferase.
   
 
 0.579
magt1
Magnesium transporter protein 1.
    
 0.539
NUP57
Nucleoporin NUP57.
    
  0.537
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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