STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v012098Uncharacterized protein. (339 aa)    
Predicted Functional Partners:
rbm8a-a
RNA-binding protein 8A-A.
    
 
 0.930
GSP1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 
 0.927
CTRI78_v001563
Protein mago nashi-like protein.
    
 
 0.927
tif11
Eukaryotic translation initiation factor 1A; Belongs to the eIF-1A family.
    
 
 0.901
ANB1
Eukaryotic translation initiation factor 5A.
    
 
 0.852
purU
Formyltetrahydrofolate deformylase.
   
 0.821
ade5
Phosphoribosylglycinamide formyltransferase.
   
 0.821
ADE1-0
Bifunctional purine biosynthetic protein ADE1; Belongs to the adenylate kinase family.
   
 0.821
ade1
Bifunctional purine biosynthetic protein ADE1.
   
 0.821
hex-1
Woronin body major protein.
    
 
 0.718
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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