STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nphp3Nephrocystin-3. (2121 aa)    
Predicted Functional Partners:
KLP1
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.845
cdc73
Cell division control protein 73.
    
 0.774
cut9
Anaphase-promoting complex subunit cut9.
    
 0.771
CTRI78_v002252
RNA polymerase II-associated protein 1-like protein.
    
 0.769
Leo1
RNA polymerase-associated protein LEO1.
    
 0.769
Anapc10
Anaphase-promoting complex subunit 10.
    
 0.768
cut20
Anaphase-promoting complex subunit 4.
    
 0.768
bimE
Negative regulator of mitosis.
    
 0.766
apc5
Anaphase-promoting complex subunit 5.
    
 0.761
CTRI78_v002423
Uncharacterized protein.
    
 0.761
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.