STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v011586Serine/threonine-protein phosphatase. (309 aa)    
Predicted Functional Partners:
CTRI78_v008458
Uncharacterized protein.
   
 0.975
CTRI78_v007291
Uncharacterized protein.
    
 0.966
plo1
Serine/threonine-protein kinase plo1.
   
 0.945
CTRI78_v011585
Serine/threonine-protein phosphatase PP-X-like protein 3.
 
     0.944
CTRI78_v003606
SMK-1 domain-containing protein.
   
 0.944
CTRI78_v007208
Uncharacterized protein.
   
 0.930
paa1
Protein phosphatase PP2A regulatory subunit A.
   
 0.916
pab1
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.908
PPP2R5D
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
    
 0.906
ekc1
Extragenic suppressor of kinetochore protein 1.
    
 0.866
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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