STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v011148Uncharacterized protein. (649 aa)    
Predicted Functional Partners:
CTRI78_v006172
Putative FAD-binding protein.
     
 0.706
trp-3
Tryptophan synthase.
    
  0.700
gcs-1
Glutamate--cysteine ligase.
    
 0.660
CTRI78_v009557
S5A_REDUCTASE domain-containing protein.
   
 
 0.529
glpK-1
Glycerol kinase; Belongs to the FGGY kinase family.
     
 0.515
MIOX1
Inositol oxygenase 1.
   
 
  0.511
glpK-0
Glycerol kinase; Belongs to the FGGY kinase family.
     
 0.501
CTRI78_v002501
Putative aldose 1-epimerase.
    
  0.480
ylo-1
Beta-apo-4'-carotenal oxygenase; Belongs to the aldehyde dehydrogenase family.
   
 0.470
ALDH3A1
Aldehyde dehydrogenase, dimeric NADP-preferring.
   
 0.468
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
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