Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTRI78_v000136 | CTRI78_v006838 | A0A4R8RT01 | A0A4R8RB79 | Uncharacterized protein. | ATP-dependent RNA helicase DEAH12. | 0.515 |
CTRI78_v000136 | CTRI78_v006839 | A0A4R8RT01 | A0A4R8RB82 | Uncharacterized protein. | ATP-dependent RNA helicase DEAH11. | 0.515 |
CTRI78_v000136 | GDE1 | A0A4R8RT01 | A0A4R8RVL8 | Uncharacterized protein. | Glycerophosphocholine phosphodiesterase GDE1. | 0.560 |
CTRI78_v000136 | mp1-1 | A0A4R8RT01 | A0A4R8QHN8 | Uncharacterized protein. | Cell wall mannoprotein 1. | 0.731 |
CTRI78_v000136 | nuc-2 | A0A4R8RT01 | A0A4R8RJP8 | Uncharacterized protein. | Ankyrin repeat protein nuc-2. | 0.517 |
CTRI78_v000136 | rga4 | A0A4R8RT01 | A0A4R8R6L4 | Uncharacterized protein. | Putative Rho-type GTPase-activating protein 4. | 0.553 |
CTRI78_v000556 | GDE1 | A0A4R8RRM0 | A0A4R8RVL8 | Uncharacterized protein. | Glycerophosphocholine phosphodiesterase GDE1. | 0.471 |
CTRI78_v000556 | mp1-1 | A0A4R8RRM0 | A0A4R8QHN8 | Uncharacterized protein. | Cell wall mannoprotein 1. | 0.696 |
CTRI78_v000556 | nuc-2 | A0A4R8RRM0 | A0A4R8RJP8 | Uncharacterized protein. | Ankyrin repeat protein nuc-2. | 0.471 |
CTRI78_v000556 | rga4 | A0A4R8RRM0 | A0A4R8R6L4 | Uncharacterized protein. | Putative Rho-type GTPase-activating protein 4. | 0.448 |
CTRI78_v006192 | SKN7 | A0A4R8RD36 | A0A4R8REM9 | Flavin_Reduct domain-containing protein. | Transcription factor SKN7. | 0.923 |
CTRI78_v006192 | mp1-1 | A0A4R8RD36 | A0A4R8QHN8 | Flavin_Reduct domain-containing protein. | Cell wall mannoprotein 1. | 0.637 |
CTRI78_v006838 | CTRI78_v000136 | A0A4R8RB79 | A0A4R8RT01 | ATP-dependent RNA helicase DEAH12. | Uncharacterized protein. | 0.515 |
CTRI78_v006838 | mp1-1 | A0A4R8RB79 | A0A4R8QHN8 | ATP-dependent RNA helicase DEAH12. | Cell wall mannoprotein 1. | 0.649 |
CTRI78_v006839 | CTRI78_v000136 | A0A4R8RB82 | A0A4R8RT01 | ATP-dependent RNA helicase DEAH11. | Uncharacterized protein. | 0.515 |
CTRI78_v006839 | mp1-1 | A0A4R8RB82 | A0A4R8QHN8 | ATP-dependent RNA helicase DEAH11. | Cell wall mannoprotein 1. | 0.649 |
GDE1 | CTRI78_v000136 | A0A4R8RVL8 | A0A4R8RT01 | Glycerophosphocholine phosphodiesterase GDE1. | Uncharacterized protein. | 0.560 |
GDE1 | CTRI78_v000556 | A0A4R8RVL8 | A0A4R8RRM0 | Glycerophosphocholine phosphodiesterase GDE1. | Uncharacterized protein. | 0.471 |
GDE1 | mp1-1 | A0A4R8RVL8 | A0A4R8QHN8 | Glycerophosphocholine phosphodiesterase GDE1. | Cell wall mannoprotein 1. | 0.693 |
GDE1 | nuc-2 | A0A4R8RVL8 | A0A4R8RJP8 | Glycerophosphocholine phosphodiesterase GDE1. | Ankyrin repeat protein nuc-2. | 0.954 |
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