STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v010487Uncharacterized protein. (232 aa)    
Predicted Functional Partners:
CTRI78_v009548
Uncharacterized protein.
   
  0.577
CTRI78_v008137
Cytochrome c oxidase subunit 6A; Belongs to the cytochrome c oxidase subunit 6A family.
   
  0.561
CTRI78_v007019
Cytochrome c oxidase subunit 6.
    
 0.559
CTRI78_v010297
Cytochrome c oxidase polypeptide 5.
    
  0.541
CTRI78_v011142
Uncharacterized protein.
   
 0.527
CTRI78_v011141
Cytochrome c oxidase subunit 4.
   
 0.527
new16
Cytochrome c oxidase subunit 6B-like protein new16.
   
  0.526
cox12
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
  0.526
STRAP
Serine-threonine kinase receptor-associated protein.
 
    
 0.509
qcr-8
Cytochrome b-c1 complex subunit 8.
   
  0.482
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.