STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ro-3Dynactin, 150 kDa isoform. (1318 aa)    
Predicted Functional Partners:
dctn2
Dynactin subunit 2.
   
 0.999
Dctn4
Dynactin subunit 4.
    
 0.985
dctn6
Dynactin subunit 6.
    
 0.984
Dctn5
Dynactin subunit 5.
    
 0.984
Dync1i2
Cytoplasmic dynein 1 intermediate chain 2.
    
 0.984
CTRI78_v004570
Dynein heavy chain.
   
 0.981
CAP2
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.974
DYNC1LI2
Cytoplasmic dynein 1 light intermediate chain 2.
   
 0.974
ro-4
Actin-like protein; Belongs to the actin family.
    
 0.957
act
Actin.
    
 0.955
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
Server load: low (18%) [HD]