STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAD1Spindle assembly checkpoint component MAD1. (763 aa)    
Predicted Functional Partners:
mad2
Mitotic spindle checkpoint component mad2.
    
 0.999
MPS1
Serine/threonine-protein kinase MPS1.
    
 0.994
slp1
WD repeat-containing protein slp1.
    
 0.992
bub1
Checkpoint serine/threonine-protein kinase bub1.
    
 0.986
CTRI78_v011576
Fizzy-related protein-like protein.
    
 0.955
AMA1
Meiosis-specific APC/C activator protein AMA1.
    
 0.952
cut9
Anaphase-promoting complex subunit cut9.
   
 
 0.943
cut20
Anaphase-promoting complex subunit 4.
     
 0.941
orc2
Origin recognition complex subunit 2.
    
 
 0.937
cut23
Anaphase-promoting complex subunit 8.
     
 0.936
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.