CTRI78_v008973 protein (Colletotrichum trifolii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CTRI78_v008973

Uncharacterized protein. (98 aa)

Predicted Functional Partners:

CTRI78_v001822

0.988

N7BM

0.984

CTRI78_v001707

0.981

CTRI78_v000361

0.978

CTRI78_v008847

0.977

CTRI78_v002227

0.971

CTRI78_v005525

0.967

CTRI78_v012093

0.966

CTRI78_v012228

0.956

CTRI78_v007578

0.952

Your Current Organism:

Colletotrichum trifolii

NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTRI78_v000361	CTRI78_v001707	A0A4R8RSD9	A0A4R8RT62	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase 14.8 kDa subunit.	0.999
CTRI78_v000361	CTRI78_v001822	A0A4R8RSD9	A0A4R8RN65	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7.	0.999
CTRI78_v000361	CTRI78_v002227	A0A4R8RSD9	A0A4R8RS26	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Uncharacterized protein.	0.744
CTRI78_v000361	CTRI78_v005525	A0A4R8RSD9	A0A4R8RHR0	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase 49 kDa subunit; Belongs to the complex I 49 kDa subunit family.	0.999
CTRI78_v000361	CTRI78_v007578	A0A4R8RSD9	A0A4R8R8J2	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase 40 kDa subunit.	0.999
CTRI78_v000361	CTRI78_v008847	A0A4R8RSD9	A0A4R8QTT7	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase 10.5 kDa subunit.	0.999
CTRI78_v000361	CTRI78_v008973	A0A4R8RSD9	A0A4R8QRY4	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Uncharacterized protein.	0.978
CTRI78_v000361	CTRI78_v012093	A0A4R8RSD9	A0A4R8PZP7	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase 29.9 kDa subunit.	0.997
CTRI78_v000361	CTRI78_v012228	A0A4R8RSD9	A0A4R8PPP7	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Uncharacterized protein.	0.995
CTRI78_v000361	N7BM	A0A4R8RSD9	A0A4R8RSC5	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
CTRI78_v001707	CTRI78_v000361	A0A4R8RT62	A0A4R8RSD9	NADH-ubiquinone oxidoreductase 14.8 kDa subunit.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
CTRI78_v001707	CTRI78_v001822	A0A4R8RT62	A0A4R8RN65	NADH-ubiquinone oxidoreductase 14.8 kDa subunit.	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7.	0.999
CTRI78_v001707	CTRI78_v002227	A0A4R8RT62	A0A4R8RS26	NADH-ubiquinone oxidoreductase 14.8 kDa subunit.	Uncharacterized protein.	0.744
CTRI78_v001707	CTRI78_v005525	A0A4R8RT62	A0A4R8RHR0	NADH-ubiquinone oxidoreductase 14.8 kDa subunit.	NADH-ubiquinone oxidoreductase 49 kDa subunit; Belongs to the complex I 49 kDa subunit family.	0.999
CTRI78_v001707	CTRI78_v007578	A0A4R8RT62	A0A4R8R8J2	NADH-ubiquinone oxidoreductase 14.8 kDa subunit.	NADH-ubiquinone oxidoreductase 40 kDa subunit.	0.999
CTRI78_v001707	CTRI78_v008847	A0A4R8RT62	A0A4R8QTT7	NADH-ubiquinone oxidoreductase 14.8 kDa subunit.	NADH-ubiquinone oxidoreductase 10.5 kDa subunit.	0.999
CTRI78_v001707	CTRI78_v008973	A0A4R8RT62	A0A4R8QRY4	NADH-ubiquinone oxidoreductase 14.8 kDa subunit.	Uncharacterized protein.	0.981
CTRI78_v001707	CTRI78_v012093	A0A4R8RT62	A0A4R8PZP7	NADH-ubiquinone oxidoreductase 14.8 kDa subunit.	NADH-ubiquinone oxidoreductase 29.9 kDa subunit.	0.996
CTRI78_v001707	CTRI78_v012228	A0A4R8RT62	A0A4R8PPP7	NADH-ubiquinone oxidoreductase 14.8 kDa subunit.	Uncharacterized protein.	0.995
CTRI78_v001707	N7BM	A0A4R8RT62	A0A4R8RSC5	NADH-ubiquinone oxidoreductase 14.8 kDa subunit.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999