STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTRI78_v009354Non-reducing polyketide synthase pks27. (2158 aa)    
Predicted Functional Partners:
npgA
4'-phosphopantetheinyl transferase NpgA.
   
 0.717
CTRI78_v010904
4HBT domain-containing protein.
   
 0.687
fabD
Malonyl CoA-acyl carrier protein transacylase.
  
0.672
atnA-1
Nonribosomal peptide synthase atnA.
 
 0.621
atnA-0
Nonribosomal peptide synthase atnA.
 
 0.613
chyA
Nonribosomal peptide synthase chyA.
  
 0.609
NRPS8
Nonribosomal peptide synthetase 8.
 
 0.604
aclP
Nonribosomal peptide synthetase aclP.
  
  0.595
NPS6
Nonribosomal peptide synthetase 6.
 
 0.588
NRPS3
Nonribosomal peptide synthase sidE.
 
  0.577
Your Current Organism:
Colletotrichum trifolii
NCBI taxonomy Id: 5466
Other names: BBA 70709, BPI 399624, C. trifolii, CBS 158.83
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.